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A terminal raphe fissure is an external extension of the distal the end of the raphe, beyond the helictoglossa. The fissure does not penetrate the valve wall. Instead, the fissure is open externally, but not internally.
The presence and the structure of the terminal raphe fissure is an important taxonomic feature. Many genera possess a terminal raphe fissure, including biraphid genera (Navicula, Cymbella, Encyonema, Fallacia) and monoraphid genera (Planothidium).