Diploneis krammeri is more elliptic and has a more expanded central area.
Diploneis calcicolafrequens is smaller and has a narrower central area.
Diploneis petersiana has more elliptic-lanceolate valves and less radiate striae.
Diploneis nevrovae has less broadly rounded ends and a higher density of areolae, 15–18 in 10 μm.